Elongation Factor Tu, Mitochondrial

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Elongation Factor Tu, Mitochondrial
  Conformer 1
(PDB)
1d2e (C)
  Conformer 2
(PDB)
1d2e (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 201 0.52   167 - 170   253 - 449
2 192 0.76   57 - 166   171 - 252

Sequence


           _____________________________________________________________________________________________________________166_170____ 
 1d2e(C) : KPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVE 
         :                                                                                                                          
 1d2e(D) : KPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQIGVE 
           _____________________________________________________________________________________________________________166_170____ 

           _______________________________________________________________________248______________________________________________ 
 1d2e(C) : HVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEETPIIVGSALCALEQRDPELGLKSVQKLLDAVDTYIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLG 
         :                                                                                                                          
 1d2e(D) : HVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEETPIIVGSALCALEQRDPELGLKSVQKLLDAVDTYIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECEFLG 
           _______________________________________________________________________248______________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1d2e(C) : HSKNIRTVVTGIEMFHKSLDRAEAGDNLGALVRGLKREDLRRGLVMAKPGSIQPHQKVEAQVYILTKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPGKELAMPGEDLKLTLILRQPM 
         :                                                                                                                          
 1d2e(D) : HSKNIRTVVTGIEMFHKSLDRAEAGDNLGALVRGLKREDLRRGLVMAKPGSIQPHQKVEAQVYILTKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPGKELAMPGEDLKLTLILRQPM 
           ________________________________________________________________________________________________________________________ 

           _____________________________________                                                                                    
 1d2e(C) : ILEKGQRFTLRDGNRTIGTGLVTDTPAMTEEDKNIKW                                                                                    
         :                                                                                                                          
 1d2e(D) : ILEKGQRFTLRDGNRTIGTGLVTDTPAMTEEDKNIKW                                                                                    
           _____________________________________                                                                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.2
Translation
(A)
-0.1
Closure
(%)
80.3
Bending Residues
( green )
  166 - 167
  170 - 171
  248 - 253
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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