Hla B3501

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hla B3501
  Conformer 1
(PDB)
1a9e (A)
  Conformer 2
(PDB)
2bvp (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 179 0.71   3 - 181
2 91 0.5   182 - 272

Sequence


           ________________________________________________________________________________________________________________________ 
 1a9e(A) : GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRNLRGYYNQSEAGSHIIQRMYGCDLGPDGRLLRGHDQSAYDG 
         :                                                                                                                          
 2bvp(A) : GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDG 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________181___________________________________________________________ 
 1a9e(A) : KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT 
         :                                                                                                                          
 2bvp(A) : KDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRT 
           __________________________________________________________181___________________________________________________________ 

           _____________________________________                                                                                    
 1a9e(A) : FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEPS                                                                                    
         :                                                                                                                          
 2bvp(A) : FQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW***                                                                                    
           _____________________________________                                                                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.8
Translation
(A)
0.1
Closure
(%)
98.3
Bending Residues
( green )
  181 - 182
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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