Modification Methylase Taqi

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Modification Methylase Taqi
  Conformer 1
(PDB)
1g38 (A)
  Conformer 2
(PDB)
2adm (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 275 0.84   25 - 258   261 - 262   331 - 333   356 - 357   361 - 368   372 - 405
2 104 0.5   259 - 260   263 - 330   334 - 355   358 - 360   369 - 371   406 - 411

Sequence


           ________________________________________________________________________________________________________________________ 
 1g38(A) : VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTGYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKY 
         :                                                                                                                          
 2adm(A) : VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTGYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVG--------vFKAVKDLYKKAFSTWKGKY 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________________________________________________________________________258__ 
 1g38(A) : NLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPL 
         :                                                                                                                          
 2adm(A) : NLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPL 
           ___________________________________________________________________________________________________________________258__ 

           ___________________________________________________________________330______________________355__360_____368____________ 
 1g38(A) : GDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSSLVQWLNSEAM 
         :                                                                                                                          
 2adm(A) : GDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSTLVQWLNSEAM 
           ___________________________________________________________________330______________________355__360_____368____________ 

           ______________________405________                                                                                        
 1g38(A) : QKHVRTLYRDFVPHLTLRMLERLPVRREYGFHT                                                                                        
         :                                                                                                                          
 2adm(A) : QKHVRTLYRDFVPHLTLRMLERLPVRREYGFHT                                                                                        
           ______________________405________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.4
Translation
(A)
0.1
Closure
(%)
98.9
Bending Residues
( green )
  258 - 263
  330 - 331
  333 - 334
  355 - 358
  360 - 361
  368 - 369
  371 - 372
  405 - 411
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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