Mta/sah Nucleosidase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Mta/sah Nucleosidase
  Conformer 1
(PDB) 		1nc1 (A)
  Conformer 2
(PDB) 		1jys (B)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 127 0.81   45 - 59   69 - 120   134 - 193
2 61 0.56   16 - 44   60 - 68   121 - 133   216 - 225

Sequence


           ____________________________________________44_____________59_______68_________________________________________________1 
 1nc1(A) : FSMKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAG 
         :                                                                                                                          
 1jys(B) : **MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAG 
           ____________________________________________44_____________59_______68_________________________________________________1 

           20__________133_________________________________________________________193_______________________________________       
 1nc1(A) : FKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG       
         :                                                                                                                          
 1jys(B) : FKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQ----sFDEFLAVAAKQSSLMVESLVQKLA**       
           20__________133_________________________________________________________193_______________________________________       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.6
Translation
(A) 		0.1
Closure
(%) 		100.0
Bending Residues
( green ) 		  44 - 48
  59 - 60
  68 - 69
  120 - 121
  133 - 134
  193 - 217
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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