Muscle-Specific Kinase Receptor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Muscle-Specific Kinase Receptor
  Conformer 1
(PDB) 		2iep (B)
  Conformer 2
(PDB) 		2iep (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 91 0.98   27 - 117
2 91 0.39   118 - 208

Sequence


           ___________________________________________________________________________________________117__________________________ 
 2iep(B) : *PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCT 
         :                                                                                                                          
 2iep(A) : LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCT 
           ___________________________________________________________________________________________117__________________________ 

           ____________________________________________________________________                                                     
 2iep(B) : TMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF                                                     
         :                                                                                                                          
 2iep(A) : TMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV*                                                     
           ____________________________________________________________________                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		22.5
Translation
(A) 		0.4
Closure
(%) 		96.5
Bending Residues
( green ) 		  117 - 118
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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