Mutt/nudix Family Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Mutt/nudix Family Protein
  Conformer 1
(PDB) 		2fml (A)
  Conformer 2
(PDB) 		2fml (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 223 2.18   30 - 266
2 24 0.64   6 - 29

Sequence


           _________________________29_____________________________________________________________________________________________ 
 2fml(A) : QFASKAEEKNYYERQASLAEFLTWYHQQELPEYEKPSLTVDvLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSRPDRDPRGWV 
         :                                                                                                                          
 2fml(B) : *FASKAEEKNYYERQASLAEFLTWYHQQ----yEKPSLTVDvLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSRPDRDPRGWV 
           _________________________29_____________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2fml(A) : VTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSEIIIKAFNRVVDKeHEPQVLQVLGKDFTITEARKVFAKFLGVDYRSIDHSNFKKAt 
         :                                                                                                                          
 2fml(B) : VTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSEIIIKAFNRVVDKeHEPQVLQVLGKDFTITEARKVFAKFLGVDYRSIDHSNFKKAt 
           ________________________________________________________________________________________________________________________ 

           __________________                                                                                                       
 2fml(A) : QYFEELGE-pSKIYQLK*                                                                                                       
         :                                                                                                                          
 2fml(B) : QYFEELGErPSKIYQLKT                                                                                                       
           __________________                                                                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		20.0
Translation
(A) 		-1.6
Closure
(%) 		95.9
Bending Residues
( green ) 		  29 - 30
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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