N5-Carboxyaminoimidazole Ribonucleotide Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name N5-Carboxyaminoimidazole Ribonucleotide Synthetase
  Conformer 1
(PDB) 		1b6r (A)
  Conformer 2
(PDB) 		1b6s (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 302 0.69   3 - 97   121 - 132   143 - 143   154 - 353
2 43 0.5   98 - 120   133 - 142   144 - 153

Sequence


           _______________________________________________________________________________________________97____________________120 
 1b6r(A) : MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRQLARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVK 
         :                                                                                                                          
 1b6s(B) : MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVK 
           _______________________________________________________________________________________________97____________________120 

           ___________________142________153_______________________________________________________________________________________ 
 1b6r(A) : RRTg------QWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELA 
         :                                                                                                                          
 1b6s(B) : RRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELA 
           ___________________142________153_______________________________________________________________________________________ 

           ___________________________________________________________________________________________________________________      
 1b6r(A) : PRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG      
         :                                                                                                                          
 1b6s(B) : PRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG      
           ___________________________________________________________________________________________________________________      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.0
Translation
(A) 		0.3
Closure
(%) 		78.8
Bending Residues
( green ) 		  97 - 98
  120 - 133
  142 - 144
  153 - 154
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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