Neutrophil Cytosolic Factor 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Neutrophil Cytosolic Factor 1
  Conformer 1
(PDB) 		1ng2 (A)
  Conformer 2
(PDB) 		1ov3 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 74 1.47   208 - 281
2 41 0.47   159 - 199

Sequence


           ______________________________________________198_______________________________________________________________________ 
 1ng2(A) : *******ILQTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKD 
         :                                                                                                                          
 1ov3(A) : LGSPEFIILQTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKD 
           ______________________________________________198_______________________________________________________________________ 

           _______________________________________________________________                                                          
 1ng2(A) : DVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVRFL                                                          
         :                                                                                                                          
 1ov3(A) : DVTGYFPSMYLQKS*************************************************                                                          
           _______________________________________________________________                                                          

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		25.4
Translation
(A) 		-0.3
Closure
(%) 		64.1
Bending Residues
( green ) 		  198 - 208
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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