Nicotinamide Mononucleotide Adenylyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Nicotinamide Mononucleotide Adenylyltransferase
  Conformer 1
(PDB) 		1kku (A)
  Conformer 2
(PDB) 		1kqo (E)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 181 1.0   12 - 158   179 - 250
2 20 0.77   159 - 178

Sequence


           __________________________________________________________________________________________________________________158___ 
 1kku(A) : EKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDvPKVKLLCGADLLE 
         :                                                                                                                          
 1kqo(E) : EKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEAa-VPKVKLLCGADLLE 
           __________________________________________________________________________________________________________________158___ 

           ______________178_________________________________________________________________________________________________       
 1kku(A) : SFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWFANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSE******************       
         :                                                                                                                          
 1kqo(E) : SFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTA       
           ______________178_________________________________________________________________________________________________       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.0
Translation
(A) 		0.0
Closure
(%) 		75.5
Bending Residues
( green ) 		  158 - 159
  178 - 179
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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