Nitric-Oxide Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Nitric-Oxide Synthase
  Conformer 1
(PDB)
1f20 (A)
  Conformer 2
(PDB)
1tll (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 366 0.99   965 - 1101   1158 - 1198   1207 - 1394
2 64 0.55   1102 - 1157   1199 - 1206

Sequence


           ________________________________________________________________________________________________________________________ 
 1f20(A) : ************************************************************************************************************************ 
         :                                                                                                                          
 1tll(A) : AKRVKATILYATETGKSQAYAKTLCEIFKHAFDAKAMSMEEYDIVHLEHEALVLVVTSTFGNGDPPENGEKFGCALMEMRHeERKSYKVRFNSVSgPLANVRFSVFGLGSRAYPHFCAFG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1f20(A) : ***********************************************************SWKRNKFRLTYVAEAPDLTQGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQ 
         :                                                                                                                          
 1tll(A) : HAVDTLLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEsNDRSWKRNKFRLTYVAEAPDLTQGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQ 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________1101__________________________________________ 
 1f20(A) : ELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSKGLQEYEEWKWGKN 
         :                                                                                                                          
 1tll(A) : ELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSKGLQEYEEWKWGKN 
           __________________________________________________________________________1101__________________________________________ 

           __________1157____________________________________1197__________________________________________________________________ 
 1f20(A) : PTMVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQR 
         :                                                                                                                          
 1tll(A) : PTMVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQR 
           __________1157____________________________________1197__________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1f20(A) : QFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVTMAADVLKAIQRIMTQQGKLSEEDAGVFISR 
         :                                                                                                                          
 1tll(A) : QFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVTMAADVLKAIQRIMTQQGKLSEEDAGVFISR 
           ________________________________________________________________________________________________________________________ 

           ______________________________                                                                                           
 1f20(A) : LRDDNRYHEDIFGV****************                                                                                           
         :                                                                                                                          
 1tll(A) : LRDDNRYHEDIFGVTLRTYEVTNRLRSESI                                                                                           
           ______________________________                                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.8
Translation
(A)
-0.4
Closure
(%)
47.0
Bending Residues
( green )
  1101 - 1102
  1157 - 1158
  1197 - 1207
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download