Ornithine Aminotransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ornithine Aminotransferase
  Conformer 1
(PDB) 		1z7d (D)
  Conformer 2
(PDB) 		1z7d (E)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 293 0.7   10 - 323   374 - 375   386 - 392
2 75 0.37   324 - 373   376 - 385   393 - 407

Sequence


           ________________________________________________________________________________________________________________________ 
 1z7d(D) : KTPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWG 
         :                                                                                                                          
 1z7d(E) : KTPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1z7d(D) : YEVKKIPENMAKIVVCKfSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLA 
         :                                                                                                                          
 1z7d(E) : YEVKKIPENMAKIVVC-fSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLA 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________323_______________________________________________373_________385____392___ 
 1z7d(D) : NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQL 
         :                                                                                                                          
 1z7d(E) : NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQL 
           _____________________________________________323_______________________________________________373_________385____392___ 

           _______________                                                                                                          
 1z7d(D) : DECTEIIVKTVKFFD                                                                                                          
         :                                                                                                                          
 1z7d(E) : DECTEIIVKTVKFFD                                                                                                          
           _______________                                                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.2
Translation
(A) 		0.0
Closure
(%) 		30.0
Bending Residues
( green ) 		  323 - 324
  373 - 376
  385 - 386
  392 - 393
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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