Phosphoribosylglycinamide Formyl Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoribosylglycinamide Formyl Transferase
  Conformer 1
(PDB) 		2czg (B)
  Conformer 2
(PDB) 		2dwc (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 352 0.23   4 - 138   205 - 421
2 47 0.43   139 - 204

Sequence


           ________________________________________________________________________________________________________________________ 
 2czg(B) : VVMIKLRDELGTATTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEFEKDGYFVVPNARATWIAMHR 
         :                                                                                                                          
 2dwc(B) : VVMIKLRDELGTATTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAINLDALFEFEKDGYFVVPNARATWIAMHR 
           ________________________________________________________________________________________________________________________ 

           ____________136____________________________________________________204__________________________________________________ 
 2czg(B) : ERLRETLVKEAKVPTSRYMYATTLDELYEACEKIGYPCHTKAI---sYFVKGPEDIPKAW---kIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGHYQIDGDYHASWQPAEISEK 
         :                                                                                                                          
 2dwc(B) : ERLRETLVKEAKVPTSRYMYATTLDELYEACEKIGYPCHTKAIMSgSYFVKGPEDIPKAWEEeKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGHYQIDGDYHASWQPAEISEK 
           ____________136____________________________________________________204__________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2czg(B) : AEREVYRIAKRITDVLGGLGIFGVEMFVKGDKVWANEVSPRPHDTGMVTLASHPPGFSEFALHLRAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSGYSPRFRGLVKALSVPNATVR 
         :                                                                                                                          
 2dwc(B) : AEREVYRIAKRITDVLGGLGIFGVEMFVKGDKVWANEVSPRPHDTGMVTLASHPPGFSEFALHLRAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSGYSPRFRGLVKALSVPNATVR 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________                                                                        
 2czg(B) : LFGKPEAYVGRRLGIALAWDKDVEVAKRKAEMVAHMIELRTRSSDWHDQ                                                                        
         :                                                                                                                          
 2dwc(B) : LFGKPEAYVGRRLGIALAWDKDVEVAKRKAEMVAHMIELRTRSSDWHDQ                                                                        
           _________________________________________________                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		23.6
Translation
(A) 		-0.3
Closure
(%) 		99.7
Bending Residues
( green ) 		  136 - 139
  204 - 210
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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