Phosphonoacetaldehyde Hydrolase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphonoacetaldehyde Hydrolase
  Conformer 1
(PDB) 		1rdf (A)
  Conformer 2
(PDB) 		1fez (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 190 1.04   7 - 26   47 - 54   97 - 258
2 62 0.66   27 - 46   55 - 96

Sequence


           ___________________25___________________46__50__________________________________________94______________________________ 
 1rdf(A) : KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMPLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGS 
         :                                                                                                                          
 1fez(A) : KIEAVIFDWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGS 
           ___________________25___________________46__50__________________________________________94______________________________ 

           ________________________________________________________________________________________________________________________ 
 1rdf(A) : TTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 
         :                                                                                                                          
 1fez(A) : TTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 
           ________________________________________________________________________________________________________________________ 

           _______________________                                                                                                  
 1rdf(A) : TIETMQELESVMEHIEKQELIIS                                                                                                  
         :                                                                                                                          
 1fez(A) : TIETMQELESVMEHIE*******                                                                                                  
           _______________________                                                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		17.6
Translation
(A) 		0.9
Closure
(%) 		99.6
Bending Residues
( green ) 		  25 - 27
  46 - 47
  50 - 55
  94 - 97
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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