Polyprotein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Polyprotein
  Conformer 1
(PDB) 		2i69 (A)
  Conformer 2
(PDB) 		2hg0 (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 228 0.91   8 - 51   133 - 199   277 - 393
2 158 1.93   52 - 132   200 - 276

Sequence


           __________________________________________44____________________________________________________________________________ 
 2i69(A) : FNCLGMSNRDFLEGVSGATWVDLVLEGDSCVTIMSKDKPTIDVKMMNMEAANLAEVRSYCYLATVSDLSTKAACPTMGEAHNDKRADPAFVCRQGVVDRGWGNGCGLFGKGSIDTCAKFA 
         :                                                                                                                          
 2hg0(A) : FNCLGMSNRDFLEGVSGATWVDLVLEGDSCVTIMSKDKPTIDVKMMNMEAANLAEVRSYCYLATVSDLSTKAACPTMGEAHNDKRADPAFVCRQGVVDRGWGNGCGLFGKGSIDTCAKFA 
           __________________________________________44____________________________________________________________________________ 

           _________132___________________________________________________________194______________________________________________ 
 2i69(A) : CSTKAIGRTILKENIKYEVAIFVHGPTTVESHGNYSTQVGATQAGRFSITPAAPSYTLKLGEYGEVTVDCEPRSGIDTNAYYVMTVGTKTFLVHREWFMDLNLPWSSAGSTVWRNRETLM 
         :                                                                                                                          
 2hg0(A) : CSTKAIGRTILKENIKYEVAIFVHGPTTVESHGNYSTQVGATQAGRFSITPAAPSYTLKLGEYGEVTVDCEPRSGIDTNAYYVMTVGTKTFLVHREWFMDLNLPWSSAGSTVWRNRETLM 
           _________132___________________________________________________________194______________________________________________ 

           _________________________________276____________________________________________________________________________________ 
 2i69(A) : EFEEPHATKQSVIALGSQEGALHQALAGAIPVEFSSNTVKLTSGHLKCRVKMEKLQLKGTTYGVCSKAFKFLGTPADTGHGTVVLELQYTGTDGPCKVPISSVASLNDLTPVGRLVTVNP 
         :                                                                                                                          
 2hg0(A) : EFEEPHATKQSVIALGSQEGALHQALAGAIPVEFSSNTVKLTSGHLKCRVKMEKLQLKGTTYGVCSKAFKFLGTPADTGHGTVVLELQYTGTDGPCKVPISSVASLNDLTPVGRLVTVNP 
           _________________________________276____________________________________________________________________________________ 

           ___________________________________________                                                                              
 2i69(A) : FVSVATANAKVLIELEPPFGDSYIVVGRGEQQINHHWHKSGSS                                                                              
         :                                                                                                                          
 2hg0(A) : FVSVATANAKVLIELEPPFGDSYIVVGRGEQQINHHWHKS***                                                                              
           ___________________________________________                                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		17.1
Translation
(A) 		0.7
Closure
(%) 		20.9
Bending Residues
( green ) 		  44 - 52
  132 - 136
  194 - 205
  276 - 278
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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