Precorrin-6y Methyltransferase/putative Decarboxylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Precorrin-6y Methyltransferase/putative Decarboxylase
  Conformer 1
(PDB) 		1l3b (F)
  Conformer 2
(PDB) 		1kxz (H)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 101 0.66   5 - 28   44 - 46   94 - 97   102 - 119   121 - 122   129 - 183
2 71 0.58   29 - 43   47 - 93   98 - 101   120 - 120   123 - 128

Sequence


           _______________________28_____________43_46___________________________________________93__97_101_______________119______ 
 1l3b(F) : IPDDEFIKNPSVPGPTAeVRCLIcLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEnLQRHGLGDNVTLeGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLK 
         :                                                                                                                          
 1kxz(H) : IPDDEFIKNPSVPGPTAeVRCLIcLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEnLQRHGLGDNVTLeGDAPEALCKIPDIDIAVVGGSGGELQEILRIIKDKLK 
           _______________________28_____________43_46___________________________________________93__97_101_______________119______ 

           128_______________________________________________________                                                               
 1l3b(F) : PGGRIIVTAILLETKFEAeCLRDLGFDVNITELNIARGRALDRGTvSRNPVALIYTGV                                                               
         :                                                                                                                          
 1kxz(H) : PGGRIIVTAILLETKFEAeCLRDLGFDVNITELNIARGRALDRGTvSRNPVALIYTGV                                                               
           128_______________________________________________________                                                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.1
Translation
(A) 		0.0
Closure
(%) 		52.5
Bending Residues
( green ) 		  28 - 29
  43 - 44
  46 - 47
  93 - 94
  97 - 98
  101 - 102
  119 - 123
  128 - 129
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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