Probable N-Acetylglucosamine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable N-Acetylglucosamine Kinase
  Conformer 1
(PDB) 		1zc6 (B)
  Conformer 2
(PDB) 		1zc6 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 155 0.47   84 - 84   108 - 110   119 - 120   127 - 277   289 - 289
2 121 0.81   11 - 83   85 - 107   111 - 118   121 - 126   278 - 288   290 - 290

Sequence


           _____________________________________________________________________________83_____________________107________118_____1 
 1zc6(B) : RQTnPSIRYLIGVDGGGTGTRIRLHASDGTPLAaEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGGQPG 
         :                                                                                                                          
 1zc6(A) : ****PSIRYLIGVDGGGTGTRIRLHASDGTPLAaEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQAPGFARLSLATDGYTTLLGAHGGQPG 
           _____________________________________________________________________________83_____________________107________118_____1 

           26______________________________________________________________________________________________________________________ 
 1zc6(B) : IIVALGTGSIGEALYPDGSHREAGGWGYPSGDEASGAWLGQRAAQLTQaLDGRHSHSPLTRAVLDFVGGDWQAaWNGRATPAQFARLAPLVLSAARVDPEADALLRQAGEDAWAIARALD 
         :                                                                                                                          
 1zc6(A) : IIVALGTGSIGEALYPDGSHREAGGWGYPSGDEASGAWLGQRAAQLTQaLDGRHSHSPLTRAVLDFVGGDWQAaWNGRATPAQFARLAPLVLSAARVDPEADALLRQAGEDAWAIARALD 
           26______________________________________________________________________________________________________________________ 

           __________________________276_________288_______                                                                         
 1zc6(B) : PQDELPVALCGGLGQALRDWLPPGFRQRLVAPQGDSAQGALLLLQRPS                                                                         
         :                                                                                                                          
 1zc6(A) : PQDELPVALCGGLGQALRDWLPPGFRQRLVAPQGDSAQGALLLLQ***                                                                         
           __________________________276_________288_______                                                                         

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.2
Translation
(A) 		-0.1
Closure
(%) 		89.4
Bending Residues
( green ) 		  83 - 92
  107 - 111
  118 - 121
  126 - 127
  276 - 278
  288 - 290
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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