Probable Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable Transcriptional Regulator
  Conformer 1
(PDB) 		2esn (C)
  Conformer 2
(PDB) 		2esn (D)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 221 0.59   72 - 299
2 65 0.55   7 - 71

Sequence


           ____________________________________________________________________71__________________________________________________ 
 2esn(C) : HPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGQSQRTFVFAATDYTAFALLPPLMNRL 
         :                                                                                                                          
 2esn(D) : *PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGQSQRTFVFAATDYTAFALLPPLMNRL 
           ____________________________________________________________________71__________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2esn(C) : QHSAPGVRLRLVNAERKLSVEALASGRIDFALGYD----rLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLA 
         :                                                                                                                          
 2esn(D) : QHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDEEHERLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLA 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________                                                           
 2esn(C) : GSTDFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQHrDAHAWMIGQLKGLDIS                                                           
         :                                                                                                                          
 2esn(D) : GSTDFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQ-rDAHAWMIGQLKGLD**                                                           
           ______________________________________________________________                                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.8
Translation
(A) 		-0.2
Closure
(%) 		83.6
Bending Residues
( green ) 		  71 - 72
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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