Probable Butyrate Kinase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable Butyrate Kinase 2
  Conformer 1
(PDB) 		1saz (A)
  Conformer 2
(PDB) 		1x9j (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 191 0.78   132 - 150   155 - 334
2 166 0.85   4 - 131   151 - 154   335 - 371

Sequence


           ________________________________________________________________________________________________________________________ 
 1saz(A) : *FRILTINPGSTSTKLSIFEDER-vK-qNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAFVSRGGLLDPIPGGVYLVDGL-iKTLKSGKNGEHASNLGAIIAHRFSSET 
         :                                                                                                                          
 1x9j(D) : MFRILTINPGSTSTKLSIFEDERMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAFVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSET 
           ________________________________________________________________________________________________________________________ 

           ________131________________150_154______________________________________________________________________________________ 
 1saz(A) : GVPAYVVDPVVVDE-eDVARVSGHPNYQRKSIFHALNQKTVAKEVAR--nKRYEE-nLVVAH-gGGISIAAHRKGRVIDVNNALDGDGPFTPERSGTLPLTQLVDLCFSGKFTYEE-kKR 
         :                                                                                                                          
 1x9j(D) : GVPAYVVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGDGPFTPERSGTLPLTQLVDLCFSGKFTYEEMKKR 
           ________131________________150_154______________________________________________________________________________________ 

           ___________________________________________________________________________________________334__________________________ 
 1saz(A) : IVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRA-aYQIAKWIGK-aAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRGEEKPKNYSEESR 
         :                                                                                                                          
 1x9j(D) : IVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRGEEKPKNYSEESR 
           ___________________________________________________________________________________________334__________________________ 

           _______________                                                                                                          
 1saz(A) : RWRERYDSYLDGILR                                                                                                          
         :                                                                                                                          
 1x9j(D) : RWRERYDSYLDGI**                                                                                                          
           _______________                                                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		17.1
Translation
(A) 		0.3
Closure
(%) 		93.7
Bending Residues
( green ) 		  131 - 132
  150 - 151
  154 - 155
  334 - 335
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download