Probable 6-Pyruvoyl Tetrahydrobiopterin Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable 6-Pyruvoyl Tetrahydrobiopterin Synthase
  Conformer 1
(PDB) 		2oba (F)
  Conformer 2
(PDB) 		2oba (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 88 0.3   3 - 39   57 - 92   101 - 115
2 25 0.36   40 - 56   93 - 100

Sequence


           _______________________________________39______________55___________________________________92_____100__________________ 
 2oba(F) : GSHeLFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD 
         :                                                                                                                          
 2oba(D) : *SHeLFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD 
           _______________________________________39______________55___________________________________92_____100__________________ 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.5
Translation
(A) 		0.3
Closure
(%) 		42.5
Bending Residues
( green ) 		  39 - 40
  55 - 63
  92 - 93
  100 - 101
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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