Protein Maf

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein Maf
  Conformer 1
(PDB)
1ex2 (A)
  Conformer 2
(PDB)
1exc (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 154 0.62   4 - 79   93 - 134   136 - 136   149 - 183
2 26 1.06   80 - 92   135 - 135   137 - 148

Sequence


           _____________________________________________________________________________79___________92____________________________ 
 1ex2(A) : MTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYD 
         :                                                                                                                          
 1exc(B) : MTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQAENHSETFYD 
           _____________________________________________________________________________79___________92____________________________ 

           ___________134___________148_____________________________________                                                        
 1ex2(A) : KTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF                                                        
         :                                                                                                                          
 1exc(B) : KTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF                                                        
           ___________134___________148_____________________________________                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.4
Translation
(A)
0.0
Closure
(%)
88.1
Bending Residues
( green )
  79 - 80
  92 - 93
  134 - 137
  148 - 149
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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