Putative Sugar Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Sugar Kinase
  Conformer 1
(PDB)
1tyy (A)
  Conformer 2
(PDB)
1tyy (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 263 0.78   7 - 15   30 - 85   103 - 306
2 23 0.96   16 - 29   86 - 102

Sequence


           _________15___________28_______________________________________________________85_______102_____________________________ 
 1tyy(A) : NKVWVIGDASVDLVPEKQNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNsFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIG 
         :                                                                                                                          
 1tyy(B) : NKVWVIGDASVDLVPEKQNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVN-fTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIG 
           _________15___________28_______________________________________________________85_______102_____________________________ 

           ________________________________________________________________________________________________________________________ 
 1tyy(A) : LTDRPAREACLEGARRrEAGGYVLFDVNLRSKwGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDA 
         :                                                                                                                          
 1tyy(B) : LTDRPAREACLEGARRrEAGGYVLFDVNLRSKwGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDA 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________                                                                  
 1tyy(A) : FVGGLLFTLSRANCWDHALLAEAISNANACGAaVTAKGAtALPFPDQLNTFLS**                                                                  
         :                                                                                                                          
 1tyy(B) : FVGGLLFTLSRANCWDHALLAEAISNANACGAaVTAK--tALPFPDQLNTFLSSH                                                                  
           _______________________________________________________                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.1
Translation
(A)
0.9
Closure
(%)
95.9
Bending Residues
( green )
  15 - 16
  28 - 30
  85 - 86
  102 - 103
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download