Putative Transcriptional Repressor (Tetr/acrr Family)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Transcriptional Repressor (Tetr/acrr Family)
  Conformer 1
(PDB) 		1t33 (A)
  Conformer 2
(PDB) 		1t33 (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 127 0.24   27 - 29   57 - 71   109 - 217
2 44 0.34   10 - 26   30 - 56

Sequence


           ________________________26_29_________________________56________________________________________________________________ 
 1t33(A) : MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSK 
         :                                                                                                                          
 1t33(B) : ******TTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSK 
           ________________________26_29_________________________56________________________________________________________________ 

           ____________________________________________________________________________________________________                     
 1t33(A) : FISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ                     
         :                                                                                                                          
 1t33(B) : FISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ                     
           ____________________________________________________________________________________________________                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.4
Translation
(A) 		-0.1
Closure
(%) 		88.7
Bending Residues
( green ) 		  26 - 27
  29 - 30
  56 - 57
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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