Putative Ornithine Carbamoyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Ornithine Carbamoyltransferase
  Conformer 1
(PDB) 		2fg6 (Z)
  Conformer 2
(PDB) 		1js1 (X)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 197 0.41   5 - 21   59 - 60   114 - 128   142 - 304
2 94 0.8   3 - 4   22 - 58   61 - 68   92 - 113   129 - 141   305 - 316

Sequence


           _____4_______________21___________________________________58____________________________________________________113_____ 
 2fg6(Z) : SHMKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENR 
         :                                                                                                                          
 1js1(X) : **MKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFNSSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENR 
           _____4_______________21___________________________________58____________________________________________________113_____ 

           __123_______________141_________________________________________________________________________________________________ 
 2fg6(Z) : EYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNW 
         :                                                                                                                          
 1js1(X) : EYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKKTARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNW 
           __123_______________141_________________________________________________________________________________________________ 

           _______________________________________________________________304____________________                                   
 2fg6(Z) : AAYLGDNYGQILSTDRNWTVGDRQMAVTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLENLP******                                   
         :                                                                                                                          
 1js1(X) : AAYTGDNYGQILSTDRNWTVGDRQMAVTNNAYFMHCLPVRRNMIVTDDVIESPQSIVIPEAANREISATVVLKRLLENLPHHHHHH                                   
           _______________________________________________________________304____________________                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.7
Translation
(A) 		0.2
Closure
(%) 		73.3
Bending Residues
( green ) 		  4 - 5
  21 - 22
  58 - 61
  113 - 119
  123 - 129
  141 - 142
  304 - 305
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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