Putative Asparaginyl Hydroxylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Asparaginyl Hydroxylase
  Conformer 1
(PDB)
1vrb (D)
  Conformer 2
(PDB)
1vrb (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 267 0.74   10 - 62   83 - 83   99 - 134   136 - 324
2 31 1.86   63 - 82   84 - 98   135 - 135

Sequence


           ___________________________________________________60________________82______________98_______________________________13 
 1vrb(D) : SVLESIISPVTsEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNNPVvVGDAVIEESd-RFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKA 
         :                                                                                                                          
 1vrb(B) : *VLESIISPVTsEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNNPVvVGDAVIEESEGrFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKA 
           ___________________________________________________60________________82______________98_______________________________13 

           2_______________________________________________________________________________________________________________________ 
 1vrb(D) : IVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPqHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTlYLPRGLWHSTKSDQATLALNITFGQPAWLDLlAALRK 
         :                                                                                                                          
 1vrb(B) : IVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPqHYDL-----yPDDLQSYWKGDPPKEDLPDAEIVNLTPGTlYLPRGLWHSTKSDQATLALNITFGQPAWLDLlAALRK 
           2_______________________________________________________________________________________________________________________ 

           ________________________________________________________________________                                                 
 1vrb(D) : KLISDNRFRELAVNHQ---eSSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLT                                                 
         :                                                                                                                          
 1vrb(B) : KLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLT                                                 
           ________________________________________________________________________                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.8
Translation
(A)
0.8
Closure
(%)
99.5
Bending Residues
( green )
  60 - 63
  82 - 84
  98 - 99
  132 - 141
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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