R.bcni

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name R.bcni
  Conformer 1
(PDB)
2odh (A)
  Conformer 2
(PDB)
2odi (B)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 176 2.88   9 - 84   86 - 88   115 - 200   217 - 231
2 38 2.7   85 - 85   89 - 114   201 - 216

Sequence


           __________________________________________________________________________________84__88______________________114_______ 
 2odh(A) : MKIWSKEEVVNKLHEIKNKGYLSVPTDMFRTDDGVVGQILERQFGVQENNITLGDLGEFELKGMRNRKAKSNLTLFHKKPVAGQTVIQIFNRFGYVKPeV----MKKKLFTTIKGGRLNN 
         :                                                                                                                          
 2odi(B) : *KIWSKEEVVNKLHEIKNKGYLSVPTD-fRTDDGVVGQILERQFGVQENNITLGDLGEFELKG-rNRKAKSNLTLFHKKPVAGQTVIQIFNRFGYVKPSSRNPEVkKKLFTTIKGGRLNN 
           __________________________________________________________________________________84__88______________________114_______ 

           ___________________________________________________________________________200______________216______________________    
 2odh(A) : LGLTLNAKHASEINLYYQDEYLSTWDLNLSKIEKLVLVFAETIGRANSPEEQFHFTKAYMLTEINDITSLINDGVLVMDLCIDQDLSKSKGPHDRGPHLRIPISKLDKLYRNIERLL    
         :                                                                                                                          
 2odi(B) : LGLTLNAKHASEINLYYQDEYLSTWDLNLSKIEKLVLVFAETIGRANSPEEQFHFTKAY-lTEINDITSLINDGVLV-dLCIDQDLSKSKGPHDRGPHLRIPISKLDKLYRNIERLL    
           ___________________________________________________________________________200______________216______________________    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
24.0
Translation
(A)
1.1
Closure
(%)
93.8
Bending Residues
( green )
  84 - 86
  88 - 89
  114 - 115
  200 - 201
  216 - 217
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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