Rcd1 Required For Cell Differentiation1 Homolog

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Rcd1 Required For Cell Differentiation1 Homolog
  Conformer 1
(PDB) 		2fv2 (D)
  Conformer 2
(PDB) 		2fv2 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 159 0.7   57 - 67   109 - 125   137 - 267
2 104 0.59   5 - 56   68 - 108   126 - 136

Sequence


           _____________________________________________________56_________67______________________________________108_____________ 
 2fv2(D) : DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRL 
         :                                                                                                                          
 2fv2(A) : *REKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRL 
           _____________________________________________________56_________67______________________________________108_____________ 

           _125____132_____________________________________________________________________________________________________________ 
 2fv2(D) : TSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQL 
         :                                                                                                                          
 2fv2(A) : TSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQL 
           _125____132_____________________________________________________________________________________________________________ 

           ____________________________                                                                                             
 2fv2(D) : KDTTFAQVLKDDTTTKRWLAQLVKNLQE                                                                                             
         :                                                                                                                          
 2fv2(A) : KDTTFAQVLKDDTTTKRWLAQLVKNLQE                                                                                             
           ____________________________                                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		9.8
Translation
(A) 		0.0
Closure
(%) 		96.1
Bending Residues
( green ) 		  56 - 57
  67 - 68
  108 - 109
  125 - 126
  132 - 141
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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