Reca Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Reca Protein
  Conformer 1
(PDB) 		1u94 (A)
  Conformer 2
(PDB) 		1xmv (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 256 0.68   9 - 279   308 - 325
2 29 1.19   280 - 307   326 - 326

Sequence


           ________________________________________________________________________________________________________________________ 
 1u94(A) : ***KQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTG 
         :                                                                                                                          
 1xmv(A) : DENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1u94(A) : EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEgLAARMMSQAMRKLAGNLKQSNTLLIFINQtTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQI 
         :                                                                                                                          
 1xmv(A) : EQALEICDALARSGAVDVIVVDSVAALTPKAEIE---------sQAMRKLAGNLKQSNTLLIFINQ----nALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQI 
           ________________________________________________________________________________________________________________________ 

           ______________279_________________________307_______________325______                                                    
 1u94(A) : LYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNP                                                    
         :                                                                                                                          
 1xmv(A) : LYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLL***                                                    
           ______________279_________________________307_______________325______                                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.2
Translation
(A) 		-0.5
Closure
(%) 		93.4
Bending Residues
( green ) 		  279 - 280
  307 - 308
  325 - 326
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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