Recombination Endonuclease VII

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Recombination Endonuclease VII
  Conformer 1
(PDB)
1e7d (B)
  Conformer 2
(PDB)
1en7 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 83 0.91   3 - 85
2 70 0.73   86 - 155

Sequence


           ___________________________________________________________________________________85___________________________________ 
 1e7d(B) : MLLTGKLYKEEKQKFYDAQNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCNAAEGQMKHKFNRSGLKGQGVDYLEWLENLLTYLKSDYTQNNIHPNFVGDKSKEFSRLG 
         :                                                                                                                          
 1en7(A) : MLLTGKLYKEEKQKFYDAQNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCNAAEGQMKHKFNRSGLKGQGVDYLEWLENLLTYLKSDYTQNNIHPNFVGDKSKEFSRLG 
           ___________________________________________________________________________________85___________________________________ 

           _____________________________________                                                                                    
 1e7d(B) : KEEMMAEMLQRGFEYNESDTKTQLIASFKKQLRKSLK                                                                                    
         :                                                                                                                          
 1en7(A) : KEEMMAEMLQRGFEYNESDTKTQLIASFKKQLRKSLK                                                                                    
           _____________________________________                                                                                    

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.4
Translation
(A)
1.2
Closure
(%)
0.7
Bending Residues
( green )
  85 - 89
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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