Ruvb

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ruvb
  Conformer 1
(PDB) 		1hqc (A)
  Conformer 2
(PDB) 		1ixr (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 275 2.14   10 - 79   81 - 103   111 - 117   136 - 310
2 26 1.91   80 - 80   104 - 110   118 - 135

Sequence


           _________________________________________________________________________79_____________________103____110____117_______ 
 1hqc(A) : ALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIG 
         :                                                                                                                          
 1ixr(C) : ALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIG 
           _________________________________________________________________________79_____________________103____110____117_______ 

           ________135_____________________________________________________________________________________________________________ 
 1hqc(A) : QGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELG 
         :                                                                                                                          
 1ixr(C) : QGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELG 
           ________135_____________________________________________________________________________________________________________ 

           __________________________________________________________________________                                               
 1hqc(A) : LEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV                                               
         :                                                                                                                          
 1ixr(C) : LEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVATELARRHL******                                               
           __________________________________________________________________________                                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		31.9
Translation
(A) 		0.8
Closure
(%) 		54.6
Bending Residues
( green ) 		  79 - 81
  103 - 104
  110 - 111
  117 - 118
  135 - 136
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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