Serine/threonine-Protein Kinase Mark1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Serine/threonine-Protein Kinase Mark1
  Conformer 1
(PDB)
2hak (F)
  Conformer 2
(PDB)
2hak (A)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 172 1.34   132 - 193   200 - 317
2 129 0.54   52 - 131   194 - 199   318 - 360

Sequence


           __________________________________________________________________________________131___________________________________ 
 2hak(F) : QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 
         :                                                                                                                          
 2hak(A) : *PHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 
           __________________________________________________________________________________131___________________________________ 

           ________________________193__198________________________________________________________________________________________ 
 2hak(F) : HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLV 
         :                                                                                                                          
 2hak(A) : HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVg--------SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLV 
           ________________________193__198________________________________________________________________________________________ 

           ____________________________317_______________________________________________                                           
 2hak(F) : LNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRIDIMVTMGFARDEINDALINQKYDEVMATYILLGRK                                           
         :                                                                                                                          
 2hak(A) : LNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRIDIMVTMGFARDEINDALINQKYDEVMATYILLGRK                                           
           ____________________________317_______________________________________________                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.6
Translation
(A)
0.0
Closure
(%)
90.7
Bending Residues
( green )
  131 - 132
  193 - 194
  198 - 215
  317 - 319
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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