Serine/threonine-Protein Kinase Chk2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Serine/threonine-Protein Kinase Chk2
  Conformer 1
(PDB)
2cn5 (A)
  Conformer 2
(PDB)
2cn8 (A)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 233 0.59   217 - 375   404 - 499
2 24 1.29   378 - 403

Sequence


           ________________________________________________________________________________________________________________________ 
 2cn5(A) : HMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRnVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 
         :                                                                                                                          
 2cn8(A) : ****YPKALRDEYIMSKTLGS----eVKLAFERKTCKKVAIKIISK-nVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 
           ________________________________________________________________________________________________________________________ 

           ____________________________372____________________________403__________________________________________________________ 
 2cn5(A) : GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 
         :                                                                                                                          
 2cn8(A) : GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--tSLMRTLC--pTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH---vSLKDQITSGKYNFIPEVWAEVSEKALD 
           ____________________________372____________________________403__________________________________________________________ 

           ___________________________________________                                                                              
 2cn5(A) : LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENE                                                                              
         :                                                                                                                          
 2cn8(A) : LVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEEN*                                                                              
           ___________________________________________                                                                              

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.1
Translation
(A)
-1.0
Closure
(%)
67.0
Bending Residues
( green )
  372 - 378
  403 - 407
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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