Serine Acetyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Serine Acetyltransferase
  Conformer 1
(PDB)
1sst (C)
  Conformer 2
(PDB)
1ssq (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 136 0.92   83 - 85   102 - 238
2 95 0.57   4 - 82   86 - 101

Sequence


           ________________________________________________________________________________82________________101___________________ 
 1sst(C) : MTLDVWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLREIIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQN 
         :                                                                                                                          
 1ssq(D) : MNLDVWQHIRQEAKELAENEPMLASFFHSTILKHQNLGGALSYLLANKLANPIMPAISLREIIEEAYQSNPSIIDCAACDIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQN 
           ________________________________________________________________________________82________________101___________________ 

           ________________________________________________________________________________________________________________________ 
 1sst(C) : RKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTg----DRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 
         :                                                                                                                          
 1ssq(D) : RKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV 
           ________________________________________________________________________________________________________________________ 

           _________________                                                                                                        
 1sst(C) : *****************                                                                                                        
         :                                                                                                                          
 1ssq(D) : SQDKAAKPAFDMNQYFI                                                                                                        
           _________________                                                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.6
Translation
(A)
-0.3
Closure
(%)
20.0
Bending Residues
( green )
  82 - 86
  101 - 102
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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