Son Of Sevenless Homolog 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Son Of Sevenless Homolog 1
  Conformer 1
(PDB) 		1nvv (S)
  Conformer 2
(PDB) 		1bkd (S)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 308 1.55   584 - 588   601 - 604   734 - 1042
2 124 1.24   573 - 583   589 - 600   605 - 733

Sequence


           _______________583__588___600___________________________________________________________________________________________ 
 1nvv(S) : QMRLPSADVYRFAEPDSEENIIFEEgIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEPEPTEADRIAIENGDQPLSAELKRFRKEYIQPVQLRVLN 
         :                                                                                                                          
 1bkd(S) : **RLPSADVYRFAEPDSEENIIFEEgIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEP----------------------rFRKEYIQPVQLRVLN 
           _______________583__588___600___________________________________________________________________________________________ 

           _______________________________________733______________________________________________________________________________ 
 1nvv(S) : VCRHWVEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKIAhNITFQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEIN 
         :                                                                                                                          
 1bkd(S) : VCRHWVEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKi----TFQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVGSVWTKEDKEIN 
           _______________________________________733______________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1nvv(S) : SPNLLKMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNI 
         :                                                                                                                          
 1bkd(S) : SPNLLKMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPCVPFFGIYLTNI 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________________________            
 1nvv(S) : LKTEEGNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKYSYPLKSPGVRPSNPR            
         :                                                                                                                          
 1bkd(S) : LKTEEGNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKYSYPLKSPGVRPSN**            
           _____________________________________________________________________________________________________________            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.5
Translation
(A) 		0.1
Closure
(%) 		96.5
Bending Residues
( green ) 		  583 - 586
  588 - 589
  600 - 605
  733 - 741
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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