Sorcin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sorcin
  Conformer 1
(PDB) 		1juo (B)
  Conformer 2
(PDB) 		1gjy (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 101 1.92   34 - 118   125 - 133   154 - 159   161 - 161
2 62 1.71   119 - 124   134 - 153   160 - 160   162 - 196

Sequence


           ____________________________________________________________________________________113________124______133_____________ 
 1juo(B) : FPGQTQDPLYGYFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 
         :                                                                                                                          
 1gjy(D) : *****MDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK 
           ____________________________________________________________________________________113________124______133_____________ 

           __151_____159_______________________________________                                                                     
 1juo(B) : RYSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV                                                                     
         :                                                                                                                          
 1gjy(D) : RYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV                                                                     
           __151_____159_______________________________________                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		21.2
Translation
(A) 		-0.5
Closure
(%) 		64.3
Bending Residues
( green ) 		  113 - 119
  124 - 129
  133 - 134
  151 - 154
  159 - 162
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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