Threonine Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Threonine Synthase
  Conformer 1
(PDB) 		1v7c (C)
  Conformer 2
(PDB) 		1uin (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 276 0.48   4 - 82   88 - 103   121 - 125   152 - 327
2 48 1.72   83 - 87   104 - 120   126 - 151

Sequence


           ____________________________________________________________________________78_______87_____________103_____________119_ 
 1v7c(C) : MRPPLIERYRNLLPVSEKTPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQS 
         :                                                                                                                          
 1uin(A) : *RPPLIERYRNLLPVSEKTPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQS 
           ____________________________________________________________________________78_______87_____________103_____________119_ 

           _124________________________151_________________________________________________________________________________________ 
 1v7c(C) : LVHGARIVQVEGNFDDALRLTQKLTEAFPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATA 
         :                                                                                                                          
 1uin(A) : LVHGARIVQVEGNFDDALRLTQKLTEAFPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATA 
           _124________________________151_________________________________________________________________________________________ 

           _______________________________________________________________________________________________________________          
 1v7c(C) : IRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATAERVAELPPPVPARLEAVAAAAGLL          
         :                                                                                                                          
 1uin(A) : IRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPASAAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATAERVAELPPPVPARLEAVAAAAGLL          
           _______________________________________________________________________________________________________________          

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		24.5
Translation
(A) 		0.2
Closure
(%) 		97.9
Bending Residues
( green ) 		  78 - 85
  87 - 88
  103 - 104
  119 - 122
  124 - 126
  151 - 157
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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