Tissue Factor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Tissue Factor
  Conformer 1
(PDB)
1a21 (B)
  Conformer 2
(PDB)
1a21 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 109 1.22   6 - 106   128 - 139   196 - 198
2 80 0.48   107 - 127   140 - 195   199 - 206

Sequence


           __________________________________________________________________________________________________106__________________1 
 1a21(B) : TGRAYNLTWKSTNFKTILEWEPKSIDHVYTVQISTRLENWKSKCFLTAETECDLTDEVVKDVGQTYMARVLSYPA-nTTGFPEEPPFRNSPEFTPYLDTNLGQPTIQSFEQVGTKLNVTV 
         :                                                                                                                          
 1a21(A) : TGRAYNLTWKSTNFKTILEWEPKSIDHVYTVQISTRLENWKSKCFLTAETECDLTDEVVKDVGQTYMARVLSYPARnTTGFPEEPPFRNSPEFTPYLDTNLGQPTIQSFEQVGTKLNVTV 
           __________________________________________________________________________________________________106__________________1 

           27____________________________________________________________195_____________                                           
 1a21(B) : QDARTLVRRNGTFLSLRAVFGKDLNYTLYYWRkKTATTNTNEFLIDVDKGENYCFSVQAVIPSRKRKQRSPESLTECT                                           
         :                                                                                                                          
 1a21(A) : QDARTLV----tFLSLRAVFGKDLNYTLYYWRkKTATTNTNEFLIDVDKGENYCFSVQAVIPSRKRKQRSPESLTECT                                           
           27____________________________________________________________195_____________                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.4
Translation
(A)
0.1
Closure
(%)
91.4
Bending Residues
( green )
  106 - 107
  127 - 141
  195 - 196
  198 - 199
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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