T-Lymphoma Invasion And Metastasis Inducing Protein 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name T-Lymphoma Invasion And Metastasis Inducing Protein 1
  Conformer 1
(PDB)
1foe (C)
  Conformer 2
(PDB)
1foe (E)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 205 0.22   1038 - 1242   1303 - 1306
2 130 0.54   1243 - 1302   1326 - 1397

Sequence


           ________________________________________________________________________________________________________________________ 
 1foe(C) : *SDADKLRKVICELLETERTYVKDLNCLeRYLKPLQKETFLTQDELDVLFGNLTEvEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVL 
         :                                                                                                                          
 1foe(E) : LSDADKLRKVICELLETERTYVKDLNCLeRYLKPLQKETFLTQDELDVLFGNLTEvEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVL 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________1240______________________________________ 
 1foe(C) : VKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRVLKYPLLLRELFALTDAESEEHYHLDVAIKTnKVASHINEqKIHEEFGAVFDQLIAEQTGEKKEVADLSgDLLLHTSVIWLNPP 
         :                                                                                                                          
 1foe(E) : VKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRVLKYPLLLRELFALTDAESEEHYHLDVAIKTnKVASHINEqKIHEEFGAVFDQLIAEQTGEKKEVADLSgDLLLHTSVIWLNPP 
           ______________________________________________________________________________1240______________________________________ 

           ___________________1302_________________________________________________________________________________________________ 
 1foe(C) : ASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHiPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 
         :                                                                                                                          
 1foe(E) : ASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHiPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 
           ___________________1302_________________________________________________________________________________________________ 

           _                                                                                                                        
 1foe(C) : Q                                                                                                                        
         :                                                                                                                          
 1foe(E) : Q                                                                                                                        
           _                                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.7
Translation
(A)
0.0
Closure
(%)
64.5
Bending Residues
( green )
  1240 - 1243
  1302 - 1333
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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