Transcription Activator Of Multidrug-Efflux Transporter Genes Mta

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Transcription Activator Of Multidrug-Efflux Transporter Genes Mta
  Conformer 1
(PDB)
1jbg (A)
  Conformer 2
(PDB)
1r8d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 69 1.09   7 - 75
2 30 0.31   76 - 105

Sequence


           _____________________________________________________________________71______________________________________            
 1jbg(A) : *KYQVKQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKKQRMDEMIQTIDRTLLS**            
         :                                                                                                                          
 1r8d(A) : MKYQVKQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKKQRMDEMIQTIDRTLLSVD            
           _____________________________________________________________________71______________________________________            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.8
Translation
(A)
-0.5
Closure
(%)
53.3
Bending Residues
( green )
  71 - 79
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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