Transcriptional Repressor Smtb

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Transcriptional Repressor Smtb
  Conformer 1
(PDB) 		1r22 (B)
  Conformer 2
(PDB) 		1r1t (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 51 0.47   52 - 102
2 38 0.5   28 - 51   103 - 116

Sequence


           ______________________________51________________________________________________102____________________                  
 1r22(B) : ******QAIAPEVAQSLAEFFAVLADPNRLRLLSLLARSELSVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQNALDHLQESR                  
         :                                                                                                                          
 1r1t(B) : AIASELQAIAPEVAQSLAEFFAVLADPNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQNALDHL****                  
           ______________________________51________________________________________________102____________________                  

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.2
Translation
(A) 		0.0
Closure
(%) 		100.0
Bending Residues
( green ) 		  51 - 53
  102 - 104
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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