Transcriptional Regulatory Protein Zrar

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Transcriptional Regulatory Protein Zrar
  Conformer 1
(PDB) 		1ojl (C)
  Conformer 2
(PDB) 		1ojl (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 164 1.03   142 - 143   145 - 309
2 77 0.47   144 - 144   310 - 385

Sequence


           __143___________________________________________________________________________________________________________________ 
 1ojl(C) : SHMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQ 
         :                                                                                                                          
 1ojl(A) : *HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGHEKGAFT---kRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQ 
           __143___________________________________________________________________________________________________________________ 

           ________________________________________________309_____________________________________________________________________ 
 1ojl(C) : EREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYIS 
         :                                                                                                                          
 1ojl(A) : EREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYIS 
           ________________________________________________309_____________________________________________________________________ 

           ________________________________________________________                                                                 
 1ojl(C) : ERELPLAIAATP********************************************                                                                 
         :                                                                                                                          
 1ojl(A) : ERELPLAIAySGEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR                                                                 
           ________________________________________________________                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.3
Translation
(A) 		0.4
Closure
(%) 		80.8
Bending Residues
( green ) 		  143 - 145
  309 - 310
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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