Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Transcriptional Regulator
  Conformer 1
(PDB) 		2o0y (B)
  Conformer 2
(PDB) 		2o0y (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 164 0.6   94 - 258
2 72 1.43   20 - 93

Sequence


           ___________________________________________________________________________________92___________________________________ 
 2o0y(B) : ***********AGVRSVTRVIDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATcARSVLTSRADGSYSLGPElRWVRLAGRTWAPPEEVVDIrQLSADTGETVNLYIRQGLSRVVVA 
         :                                                                                                                          
 2o0y(C) : TDSAEKPAVADAGVRSVTRVIDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATcARSVLTSRADGSYSLGPElRWVRLAGRTWAPPEEVVDIrQLSADTGETVNLYIRQGLSRVVVA 
           ___________________________________________________________________________________92___________________________________ 

           ________________________________________________________________________________________________________________________ 
 2o0y(B) : QCESTATVRSVIPLGVPYPLWAGAAGKILLLAAPELIDDVAADSPHGPEFADQLREKVEDGRERGYQLVHGERELGSSGLSFPLVDSHGTVVAALTLGGPTGRFTEDRTPHYIECTRAAA 
         :                                                                                                                          
 2o0y(C) : QCESTATVRSVIPLGVPYPLWAGAAGKILLLAAPELIDDVAADSPHGPEFADQLREKVEDGRERGYQLVHGERELGSSGLSFPLVDSHGTVVAALTLGGPTGRFTEDRTPHYIECTRAAA 
           ________________________________________________________________________________________________________________________ 

           ____________                                                                                                             
 2o0y(B) : EEISAIGLPGLD                                                                                                             
         :                                                                                                                          
 2o0y(C) : EEISAIGLPGLD                                                                                                             
           ____________                                                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		141.0
Translation
(A) 		3.2
Closure
(%) 		33.4
Bending Residues
( green ) 		  92 - 94
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download