Trna (Guanine-N(1)-)-Methyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Trna (Guanine-N(1)-)-Methyltransferase
  Conformer 1
(PDB) 		1uaj (A)
  Conformer 2
(PDB) 		1ual (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 162 0.61   1 - 175
2 69 0.63   176 - 244

Sequence


           ________________________________________________________________________________________________________________________ 
 1uaj(A) : GLVPRGSHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVC 
         :                                                                                                                          
 1ual(A) : ******SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVC 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________175__________________________________________________________________ 
 1uaj(A) : GRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL----gLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQ 
         :                                                                                                                          
 1ual(A) : GRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLsFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQ 
           ___________________________________________________175__________________________________________________________________ 

           _________                                                                                                                
 1uaj(A) : AEHNS****                                                                                                                
         :                                                                                                                          
 1ual(A) : AEHNSLEHH                                                                                                                
           _________                                                                                                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.9
Translation
(A) 		0.1
Closure
(%) 		83.1
Bending Residues
( green ) 		  175 - 176
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download