Tryptophan Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Tryptophan Synthase
  Conformer 1
(PDB) 		2tys (B)
  Conformer 2
(PDB) 		1qoq (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 297 0.48   5 - 96   187 - 391
2 90 0.69   97 - 186

Sequence


           ___________________________________________________________________________________________94___________________________ 
 2tys(B) : *TLLNPYFGEFGGMYVPQILMPALNQLEEAFVRAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHTTNQVLGQALLAKRMGKSEIIAETGAGQHGVASAL 
         :                                                                                                                          
 1qoq(B) : TTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASAL 
           ___________________________________________________________________________________________94___________________________ 

           ______________________________________________________________186_______________________________________________________ 
 2tys(B) : ASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 
         :                                                                                                                          
 1qoq(B) : ASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALADWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMF 
           ______________________________________________________________186_______________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2tys(B) : ADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKM 
         :                                                                                                                          
 1qoq(B) : ADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKM 
           ________________________________________________________________________________________________________________________ 

           ____________________________________                                                                                     
 2tys(B) : MREQPEKEQLLVVNLSGRGDKDIFTVHDILKARGEI                                                                                     
         :                                                                                                                          
 1qoq(B) : MREQPEKEQLLVVNLSGRGDKDIFTVHDILKARG**                                                                                     
           ____________________________________                                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.9
Translation
(A) 		0.6
Closure
(%) 		92.7
Bending Residues
( green ) 		  94 - 97
  186 - 187
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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