Type 4 Fimbrial Biogenesis Protein Pilf

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Type 4 Fimbrial Biogenesis Protein Pilf
  Conformer 1
(PDB) 		2ho1 (A)
  Conformer 2
(PDB) 		2ho1 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 116 0.7   132 - 249
2 97 1.09   34 - 131

Sequence


           _________________________________________________________________________________________________131____________________ 
 2ho1(A) : KGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEePKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 
         :                                                                                                                          
 2ho1(B) : *GRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEePKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVS 
           ________________________________________________________________________________________________1131____________________ 

           ___________________________________________________________________________________________________                      
 2ho1(A) : LQkKPAQAKEYFEKSLRLNRNQPSVALEaDLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQAEK                      
         :                                                                                                                          
 2ho1(B) : LQkKPAQAKEYFEKSLRLNRNQPSVALEaDLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQAEK                      
           ___________________________________________________________________________________________________                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		10.3
Translation
(A) 		0.6
Closure
(%) 		53.6
Bending Residues
( green ) 		  131 - 132
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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