Ubiquitin-Activating Enzyme E1c

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ubiquitin-Activating Enzyme E1c
  Conformer 1
(PDB) 		1r4m (D)
  Conformer 2
(PDB) 		1tt5 (D)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 292 1.07   23 - 212   288 - 603
2 75 0.8   213 - 287

Sequence


           ________________________________________________________________________________________________________________________ 
 1r4m(D) : DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFN 
         :                                                                                                                          
 1tt5(D) : *****WNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFN 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________212_______________________________________ 
 1r4m(D) : DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMATIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDG 
         :                                                                                                                          
 1tt5(D) : DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDG 
           ______________________________________________________________________________212_______________________________________ 

           _________________________________287____________________________________________________________________________________ 
 1r4m(D) : DDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNS 
         :                                                                                                                          
 1tt5(D) : DDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQ------lQEVLDYLTNS 
           _________________________________287____________________________________________________________________________________ 

           ___________________________________________________________                                                              
 1r4m(D) : ASLQMKSPAITAT-nRTLYLQSvTSIEERTRkELGLVDGQEaVADVTTPQTVLFKLHFT                                                              
         :                                                                                                                          
 1tt5(D) : ASLQMKSPAITATkNRTLYLQ-vTSIEERTRPl--------AVADVTTPQTVLFK****                                                              
           ___________________________________________________________                                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.5
Translation
(A) 		-0.2
Closure
(%) 		89.9
Bending Residues
( green ) 		  212 - 216
  287 - 290
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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