Udp-Glcnac C6 Dehydratase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Glcnac C6 Dehydratase
  Conformer 1
(PDB) 		2gna (B)
  Conformer 2
(PDB) 		2gn4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 251 0.34   9 - 173   207 - 234   260 - 260   264 - 316   320 - 323
2 68 0.74   174 - 206   235 - 259   261 - 263   317 - 319   324 - 327

Sequence


           ________________________________________________________________________________________________________________________ 
 2gna(B) : **MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS 
         :                                                                                                                          
 2gn4(A) : QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________171________________________________206________________________233___________ 
 2gna(B) : QVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAK 
         :                                                                                                                          
 2gn4(A) : QVIALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAK 
           ____________________________________________171________________________________206________________________233___________ 

           ____________259_263______________________________________________312____319_323__________                                
 2gna(B) : ALAPNTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHNNNQWLEPDDLLKLL                                
         :                                                                                                                          
 2gn4(A) : ALAPNTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTKLHEKGQKVAPDFEYSSHNNNQWLEPDDLLKLL                                
           ____________259_263______________________________________________312____319_323__________                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.6
Translation
(A) 		0.4
Closure
(%) 		99.0
Bending Residues
( green ) 		  171 - 174
  206 - 208
  233 - 235
  259 - 261
  263 - 264
  312 - 317
  319 - 320
  323 - 324
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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