Udp-N-Acetylglucosamine 2-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-N-Acetylglucosamine 2-Epimerase
  Conformer 1
(PDB)
1v4v (A)
  Conformer 2
(PDB)
1v4v (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 196 0.35   8 - 180   348 - 374
2 163 0.79   181 - 347

Sequence


           ________________________________________________________________________________________________________________________ 
 1v4v(A) : GkRVVLAFGTRPEATKaPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVqERQALPDLAARILPQAARALKEgADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS 
         :                                                                                                                          
 1v4v(B) : *KRVVLAFGTRPEATKaPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVqERQALPDLAARILPQAARALKEgADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________179____________________________________________________________________ 
 1v4v(A) : GNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVThRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVF 
         :                                                                                                                          
 1v4v(B) : GNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVThRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVF 
           _________________________________________________179____________________________________________________________________ 

           _____________________________________________________________________________________________347________________________ 
 1v4v(A) : PVLKGVRNFVLLDPLEYGSaALrASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENPEELSRrKAKNPYGDGKAGLvARGVAWRLGLGPRPE 
         :                                                                                                                          
 1v4v(B) : PVLKGVRNFVLLDPLEYGSaALrASLLLVTDSGGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLENPEELSRrKAKNPYGDGKAGLvARGVAWRLGLGPRPE 
           _____________________________________________________________________________________________347________________________ 

           ____                                                                                                                     
 1v4v(A) : DWLP                                                                                                                     
         :                                                                                                                          
 1v4v(B) : DWLP                                                                                                                     
           ____                                                                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
16.0
Translation
(A)
0.1
Closure
(%)
99.8
Bending Residues
( green )
  179 - 181
  347 - 348
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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