Udp-N-Acetylglucosamine-N-Acetylmuramyl- (Pentapeptide) Pyrophosphoryl-Undecaprenol N- Acetylglucosamine Transferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-N-Acetylglucosamine-N-Acetylmuramyl- (Pentapeptide) Pyrophosphoryl-Undecaprenol N- Acetylglucosamine Transferase
  Conformer 1
(PDB) 		1f0k (B)
  Conformer 2
(PDB) 		1f0k (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 317 0.59   16 - 60   81 - 352
2 20 1.9   61 - 80

Sequence


           __________________________________________________58____________________80______________________________________________ 
 1f0k(B) : KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE 
         :                                                                                                                          
 1f0k(A) : KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE 
           __________________________________________________58____________________80______________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1f0k(B) : QNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFID 
         :                                                                                                                          
 1f0k(A) : QNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFID 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________________________________          
 1f0k(B) : DMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVARAL          
         :                                                                                                                          
 1f0k(A) : DMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVARAL          
           _______________________________________________________________________________________________________________          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		20.8
Translation
(A) 		-0.2
Closure
(%) 		86.4
Bending Residues
( green ) 		  58 - 61
  80 - 83
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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