Ure2 Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ure2 Protein
  Conformer 1
(PDB) 		1k0b (D)
  Conformer 2
(PDB) 		1jzr (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 223 0.79   102 - 265   270 - 271   296 - 352
2 28 1.25   266 - 269   272 - 295

Sequence


           ________________________________________________________________________________________________________________________ 
 1k0b(D) : HVEYSRITKFFQEQPLEGYTLFSHRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDNLSIWESGAILLHLVNKYYKETGNPLLWSDDLADQSQINAW 
         :                                                                                                                          
 1jzr(C) : ****SRITKFFQEQPLEGYTLFSHRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDNLSIWESGAILLHLVNKYYKETGNPLLWSDDLADQSQINAW 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________265_269_______________________295________________________________________ 
 1k0b(D) : LFFQTSGHAPMIGQALHFRYFHSQKIASAVERYTDEVRRVYGVVEMALAERREALVMELDTENAAAYSAGTTPMSQSRFFDYPVWLVGDKLTIADLAFVPWNNVVDRIGINIKIEFPEVY 
         :                                                                                                                          
 1jzr(C) : LFFQTSGHAPMIGQALHFRYFHSQKIASAVERYTDEVRRVYGVVEMALAERREALVMELDTENAAAYSAGTTPMSQSRFFDYPVWLVGDKLTIADLAFVPWNNVVDRIGINIKIEFPEVY 
           _______________________________________________265_269_______________________295________________________________________ 

           ___________________                                                                                                      
 1k0b(D) : KWTKHMMRRPAVIKALRGE                                                                                                      
         :                                                                                                                          
 1jzr(C) : KWTKHMMRRPAVIKALRGE                                                                                                      
           ___________________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		24.5
Translation
(A) 		0.3
Closure
(%) 		91.5
Bending Residues
( green ) 		  265 - 266
  269 - 272
  295 - 296
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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