Utrophin Actin Binding Region

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Utrophin Actin Binding Region
  Conformer 1
(PDB) 		1qag (B)
  Conformer 2
(PDB) 		1qag (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 116 0.42   33 - 151
2 101 0.34   152 - 254

Sequence


           _____________________________________________________________________________________________________________145________ 
 1qag(B) : DVQKKTFTKWINARFSKSGKPPINDfTDLKDGRKLLDLLEGLTGTSLPKERGSTRVHALNNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIILHWQVKDVkDVsDLQQTNSE 
         :                                                                                                                          
 1qag(A) : DVQKKTFTKWINARFSKSGKPPINDfTDLKDGRKLLDLLEGLTGTSLPKERGSTRVHALNNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIILHWQVKDVkDVsDLQQTNSE 
           _____________________________________________________________________________________________________________145________ 

           _____________________________________________________________________________________________________                    
 1qag(B) : KILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKsPIERLEHAFSKAQTYLGIEKLLDPEDVAVRLPDKKSIIyLTSLFEVLPQ                    
         :                                                                                                                          
 1qag(A) : KILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKsPIERLEHAFSKAQTYLGIEKLLDPEDVAVRLPDKKSIIyLTSLFEVLPQ                    
           _____________________________________________________________________________________________________                    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.5
Translation
(A) 		4.5
Closure
(%) 		98.6
Bending Residues
( green ) 		  145 - 156
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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